I quit gradschool a month after publishing this so can't comment on what Suman is currently working on, but it looks like it is still mostly my code for generation.
I didn't write the script for using polarSSL but I wrote most the other ones,the testing harness, cert generation and cert crawling, and I can say that polarSSL loved to crash on my weird certs. I almost wanted to remove them from the tested list for being so unreliable.
https://www.cs.utexas.edu/~shmat/shmat_oak14.pdf
github: https://github.com/sumanj/frankencert